Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYQYHCACCDKVV-----A-STDKSCPYCGSHHIRSPYGLWMFCVMACLAVVVVFKVVHLYIQNHQDTPVQSTLLDVLNEGDKSTKQ
4AYB Chain:P ((5-39))-----RCGKCWKTFTDEQLKVLPGVRCPYCGYKIIFMVRK------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 78 -6508 -83.43 -224.40
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain P : 0.50

3D Compatibility (PKB) : -83.43
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.770

(partial model without unconserved sides chains):
PDB file : Tito_4AYB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AYB-query.scw
PDB file : Tito_Scwrl_4AYB.pdb: