Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQALLLITSAIFISACSPYIVTANPNYSASKSDEKAEKIKNLFNEAHTTGVLVIQQGQTQQSYGNDLARASTEYVPASTFKMLNALIGLEHHKATTTEVFKWDGQKRLFPEWEKNMTLGDAMKASAIPVYQDLARRIGLELMSNEVKRIGYGNADIGTQVDNFWLVGPLKITPQQEAQFAYKLANKTLPFSQKVQDEVQSMLFIEEKNGNKIYAKSGWGWDVNPQVGWLTGWVVQPQGNIVAFSLNLEMKKGISSSVRKEITYRGLEQLGIL
4WM9 Chain:A ((2-245))----------------------------HISSQQHEKA--IKSYFDEAQTQGVIIIKEGKNLSTYGNALARANKEYVPASTFKMLNALIGLENHKATTNEIFKWDGKKRTYPMWEKDMTLGEAMALSAVPVYQELARRTGLELMQKEVKRVNFGNTNIGTQVDNFWLVGPLKITPVQEVNFADDLAHNRLPFKLETQEEVKKMLLIKEVNGSKIYAKSGWGMG--PQVGWLTGWVEQANGKKIPFSLNLEMKEGMSGSIRNEITYKSLENLGII


General information:
TITO was launched using:
RESULT:

Template: 4WM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1315 -100433 -76.37 -415.01
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -76.37
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.615

(partial model without unconserved sides chains):
PDB file : Tito_4WM9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WM9-query.scw
PDB file : Tito_Scwrl_4WM9.pdb: