Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATA--SSKMVCGQVLDLQAEA-KQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHFGEN-AKELVEISQFLLARTN
3KRF Chain:A ((21-295))---------------------------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGG-DESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAA-----ATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAI-LGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTK----------------KTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN


General information:
TITO was launched using:
RESULT:

Template: 3KRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1210 -12910 -10.67 -51.03
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -10.67
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_3KRF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KRF-query.scw
PDB file : Tito_Scwrl_3KRF.pdb: