Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTLHSEKFAINFFIVDQVPQFARRIMTQVPQIGSRCVFKEKRFDIVGVEWCLDEDATNYEYQARINIELKPV
1CSE Chain:I ((51-70))----------RVRVFYNPGT-----NVVNHVPHVG---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1CSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 25 -4133 -165.30 -206.63
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain I : 0.62

3D Compatibility (PKB) : -165.30
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_1CSE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CSE-query.scw
PDB file : Tito_Scwrl_1CSE.pdb: