Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVIDALRKRRAVKRFDPAFQLSENDKKQLLQEVLANAPSAFNLQHWRPVIVEDAELRQKIR--AIAWDQPQVTESSLLIVLCAKVNTWEVDAKRVW-----DGA-SPEVQDIMVGAIDQYYRD-RPQTQRDEVMRSAGIFAQTLMLLAQEHGLDSCPMDGFDFDAMAKLINL-PEDHVVCLMIAVGKSASEPYLRVGKLPYDDVIIQNTF
4QLY Chain:A ((14-203))-DLADVMFNRHSVRQFDPNVKIGRDELQKMIAEA-ATAPSACNLQSWHFVVVDTPEAKAKFKQAVMKFNYPQVDSASAIVFIAGDTQSHYV-YRDVWNKVYEDGNITKERLDQILGTFLPLYENATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGIDFEKMIPTLGLDPKRYVPVMGIAIGKAAQEP------------------


General information:
TITO was launched using:
RESULT:

Template: 4QLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 759 -20962 -27.62 -116.45
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -27.62
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_4QLY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QLY-query.scw
PDB file : Tito_Scwrl_4QLY.pdb: