Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPNLNKRMQKAFAQL-SEVKDIVMVFGFVNQTEDGQR-YNSAAVMKDGQVLGVFNKHNLPNYGVFDEKRYFQKGHQH----------------LVF---EYLGHKFGVLICEDIWSINTVKQLSQLNVDTVLV-LNSSPYEVGKPQHRKQTLSELAKQLHLNTVYVNQVGGQD--DLIFDGTSFVSNQNGEIALQAPSF-----------------KEDLYIAEFDR------------------------DTKLYKVVESAPAL--------ETFAEIYQGLVMATRDYVERSGFPGVILGLSGGIDSALTLAIAVDAIGAE-----RVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVNSFMQTL-YPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTL-YGDMVGGFAVLKDVYKTIVFELAKYRNSLSETPVIPERVITRPPSAELRPDQKDQDSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRITSRAFSRERRYPIVNGWTAND
3DLA Chain:A ((14-541))----RVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPG-----HTKNNAIKLARALGVTFSEIDIGDTARLMLHTIGH--------DVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGE--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2277 -51097 -22.44 -121.95
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -22.44
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_3DLA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DLA-query.scw
PDB file : Tito_Scwrl_3DLA.pdb: