Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFARQHFRKHQAKSAAEQAAEFGSMKNATAYELQLMQLNNDRARLKQIQSTENKIKLKAELLPTYAPYIDGILEAQSGVQDEILTEIMIWNIDTSNFSRALQIAEYVLVHNLALPDRFERTPACVITEEISAAFLKQLKTNVEID-IDVLKQLESLMTNPDLPEKTLDMPDQVKAKMYLALGKAEIRFISDKDKPDLVHTKAAADYLQKAVELDDKC-GGRGDLNMVQKLLDKFAPATEANKGDAAASS
2HR2 Chain:B ((20-150))------------------------------------------------------------------------------------------RQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR--RGEL-NQDEGKLWISAVYSRALALDGLGR---------GAEAMPEFKKVVEMIEERKGETPGKERMMEVAI-----------------


General information:
TITO was launched using:
RESULT:

Template: 2HR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 510 -7049 -13.82 -54.64
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -13.82
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_2HR2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HR2-query.scw
PDB file : Tito_Scwrl_2HR2.pdb: