Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVIALFSKNWSRTMSATIVNTTDDNFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSSEYAGKVKIVKVDVTSCEETAVKYNIRNIPALLLFKNGEVVAQQIGAVPRSKLVSFIDENV
5HR1 Chain:A ((2-107))--------------SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN-


General information:
TITO was launched using:
RESULT:

Template: 5HR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 472 -80740 -171.06 -761.70
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -171.06
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.766

(partial model without unconserved sides chains):
PDB file : Tito_5HR1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HR1-query.scw
PDB file : Tito_Scwrl_5HR1.pdb: