Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQKNMFLNIFMVLLVLIAASFVISLFVSVLSGLLWFAVKVLIPIALIIWLVRWIKGNTHRKNYY
2LJ2 Chain:A ((38-67))--------------------------------ALTGYLDYVLLPALAIFIGLTIYAIQRKRQ---


General information:
TITO was launched using:
RESULT:

Template: 2LJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 22 -5267 -239.39 -175.55
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -239.39
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.223

(partial model without unconserved sides chains):
PDB file : Tito_2LJ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LJ2-query.scw
PDB file : Tito_Scwrl_2LJ2.pdb: