Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRKGPVAKRDVLPDPIYNSKLVTRLINRVMVDGKRGIAANIIYNAFDLIKESTGNDPLEVFEQAMKNVQPVLEVKARRVGGSNYQVPVEVRPERRVTLGLRWVVNYARLRGEHTMEERLAKEIMDAANNTGASVKKREDTHKMADANRAFAHYRW
5ME0 Chain:G ((2-152))-PRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFA----


General information:
TITO was launched using:
RESULT:

Template: 5ME0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 578 -42309 -73.20 -280.19
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain G : 0.87

3D Compatibility (PKB) : -73.20
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_5ME0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ME0-query.scw
PDB file : Tito_Scwrl_5ME0.pdb: