Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMYKMTRRSTMLETYLEKSIFRQVYICEQLHEKGTIQIREIADQLNVCPLTVTNDLECITDILHQQIISVEKSRSSFTVAFDSSFSRLALTQLIYQRSDFFNVLGHYLSGEHNWSNIADTTFISLSKVYNLRNELINFFKQMQYLNADGHFEIPEKDYRSLLLTIIYETNRTELIQLNKSIIQSGQQLIDYVEKHFFSRSYPTVEKQFILLGIAIGLQRSKTNPIYFSQEEKRVARHTPLFQLIQKGLEQLSFSLCHDEDECLYIYFLFNSRNYLCDNFELLQKDLNVVYQNHVADNPLVIELSQKLILSLNISEENQILFDKALLPFIRSLWADIQIFQPDKTYLLNEEQRALYLEVHEILEQWRKQNNL--FLR-WNENSIRKLTISLSLLNEHKRKSPIEVFIVAPSDFRYLYYRQQLEDILGEHFSISNIICKQLREIVDDTFFCTQRIILCDSSLYQEGLGSEKTIIYPITFQTIHTVIDQLNKQI
5D8K Chain:B ((26-99))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNGQSFLVLDEQRF----AKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVE--------FQHPYFKQGQDDLL------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5D8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 164 -6675 -40.70 -94.01
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain B : 0.53

3D Compatibility (PKB) : -40.70
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.428

(partial model without unconserved sides chains):
PDB file : Tito_5D8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D8K-query.scw
PDB file : Tito_Scwrl_5D8K.pdb: