Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVGRKRVITPTPVKEAALKHGIRVLQPEKISGSPEMEEIIELVPDVIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGGAPVHYAIMNGEKETGVTIMEMIKKMDAGGIYAQESIPITKQDDVGTMFEKLSLLGRKLLLETLPNILDGQK-PVPQDESEATFSPNITREQEAIDWHKTAEEIDNQVRGMRPWPIAFTTYEGIRWKLLSVEVLAETTDKAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQAVHDFLNGSGQQVQIGQQVK
3Q0I Chain:A ((9-318))--RIVFAGTPDFAARHLAALLSSEHEIIAVYTQPE---------TASPVKTLALEHNVPVYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVAENSIKVWQARVETRAVTQTPGTIIQADKSGIYVATG-QDVLVLESLQIPGKKALPVQDILNARADWFSVGSQLS


General information:
TITO was launched using:
RESULT:

Template: 3Q0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1627 -124493 -76.52 -414.98
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -76.52
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_3Q0I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q0I-query.scw
PDB file : Tito_Scwrl_3Q0I.pdb: