Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEVKDLVKTFGNYTAVDHVSFQIPDGKIMGLIGQNGAGKTTTFRLILDFLTQDQGEVLWNGHH-----LGEKDYDVIGYLPEERGLYPKVTIQDQLLYFAELRGK-SRKEIEPKIDFWMEKFQVKGKKTDKVKSLSKGNQQKVQLIATLIHEPKLIILDEPFSGLDPVNAELLKDGILELKKHGSCVIFSSHNMDNVEKICDHLIMLRNGKMVLNGKVHEIRESFGRTKLFLESGLSQQEVEEIEGVKKVILHEDNTLEITLEDPEAGKEIFTRATQFGYIPMFNQQPPTLEEIFKLKAGEIDA
4P33 Chain:A ((3-223))-LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1109 -2897 -2.61 -13.47
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -2.61
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_4P33.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P33-query.scw
PDB file : Tito_Scwrl_4P33.pdb: