Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLSVQELSKNFGHKQALSDVSFSLSPGKIVGLVGPNGAGKTTIMKAILGLIHYSDGTICIGENEIS--PSSHKGLEQVGALIEYPGIYPFLTGYDHL-KLFSETNDVSA--IDTIVNQLKMEKYIH----KKAKSYSLGMKQKLGIALALLNHPSIVILDEPMNGLDPQATRDVRKIITDLATQGTSFLISSHLLSELEKMVDELILINQGKIIKQCTMAELNQTAQDFIVISTTNDLAARTILTEAGYTLEDPDKIKLLKENEELLGTVIQLLSAQNIHVTDVQHLTNDLESSLLEILDSVKGEEEK
4P31 Chain:A ((2-225))--TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4P31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1134 -34691 -30.59 -161.35
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -30.59
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_4P31.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P31-query.scw
PDB file : Tito_Scwrl_4P31.pdb: