Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGLIGS-GQMGNRVEEVAQERGD---TVLLLRTAP----KEATTL--------AFTELPEL-------LIDFSHPDNLEKILSYSLSYQLPLVIGTTGYTQSQFQEIKEHAKHVPVMYSANFSFGIMVMNQLIKQAA-AMLQGWQIELIEKHHSRKKDAPSGTANMLLQTIQEVQKLQ----PVYNWQG--KKREENQIGVHSIRAGSLPGEHDVLFAATDEIFTIKHESFSNRIFAAGAVEAADWLKDQSPGYYKLEDLLMDKGV
3IJP Chain:A ((22-284))MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALDDDFDIEIYEMHHANKVDSPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHTGKREKGTIGFACSRGGTVIGDHSITFAGENERIVLSHIAQERSIFANGALKAALWAKNHENGLYSMLDVL-----


General information:
TITO was launched using:
RESULT:

Template: 3IJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1182 28462 24.08 122.15
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 24.08
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3IJP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IJP-query.scw
PDB file : Tito_Scwrl_3IJP.pdb: