Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAIAGAGAMGSRFGLMLHQSGNEVLLIDGWAEHVQQIKEHGLQANFNGKEVEAKLPIVLQSEVEKEDQVDLIILFTKAMQLEKMLQDIQSLIKKDTEVLCLLNGIGHEDIIEKFVPMENIYIGNTMWTAGLEGPGQVKLFGSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSDNIHYSIYRKACVNGTMNGLCTILDVNMAELGKTSTAHKMVATIVNEFAKVAAVEKIELDVPEVIAHCESCFDP-ETIGLHYPSMYQDLIKNHRLTEIDYINGAISRKGKKYGVATPYCDFLTELVHAKEDSLNVK
5HWS Chain:A ((1-295))MRIYVLGAGSIGSLFGALLARAGNDVTLI-GRREQVDAINKNGLHV-FGAEEFTVKPKATIYA---PEEPPDLLILAVKSYSTKTALEAARQCIGRNTWVLSIQNGLGNEELALKYTP--NVMGGVTTNGAMLVEWGKVLWAGKGITVIGRYPTGRDDFVDEVASVFNEAGIDTSVTENAIGWKWAKAIVNSVINGLGTVLEVKNGHLKDDPHLEGISVDIAREGCMVAQQLGIEFE----IHPLELLWDTIERTRENYNSTLQDIWRG-RETEVDYIHGKIVEYARSVGMEAPRNELLWVLVKAKE------


General information:
TITO was launched using:
RESULT:

Template: 5HWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1749 -153202 -87.59 -521.09
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -87.59
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_5HWS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HWS-query.scw
PDB file : Tito_Scwrl_5HWS.pdb: