Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNPKPQEWKSEELSQGRIIDYKAFNFVDGEGVRNSLYVSGCMFHCEGCYNVATWSFNAGIPYTAELEEQIMADLAQPYVQGLTLLGGEPFL-----NTGILLPLVKRIRKELP--DKDIWSWTGYTWEEMMLETPDKLE--LLSLIDILVDGRYDRTKRNLMLQFRGSSNQRIIDVQKSLKSGQVVIWDKLNDGKESYEQVKRE
5EXJ Chain:A ((96-235))------------------------------------IGGDQCTRRCDFCQIDTGK----PAELDRDEPRRVADSVRTMGLRYATVTGVARDDLPDGGAWL-YAATVRAIKELNPSTGVE-LLIPDFNGEP---TRLAEVFESGPEVLAHNVETV-P-RIFKRIRP--AFTYRRSLGVLTAARDAGLVTK----------------


General information:
TITO was launched using:
RESULT:

Template: 5EXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 598 -11273 -18.85 -86.05
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -18.85
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_5EXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EXJ-query.scw
PDB file : Tito_Scwrl_5EXJ.pdb: