Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNFLPAEEQLALIQRGTHEIISEE-DLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKLKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVF--KILDPN--KTKVRFNSEWFNQKSAADLIQ-LASQQTVSRMLERDDFTKRYNN-HQPIAIHEFLYPLVQGYDSIALE----ADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGVFD---APGAMYQKVLSMPDSLIERYFDLLSFK-SLDEIKALLDEIAAGRNPQEVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNAAAAKDAVARGAVKVDWNVVDASFSVKENGTFIIQSGKKAIARVTFTD
2YXN Chain:A ((2-321))----ASSNLIKQLQERGLVAQVTDEEALAERLA-QGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGT-KFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFF-TFMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAK--------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YXN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1487 21834 14.68 71.59
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 14.68
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_2YXN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YXN-query.scw
PDB file : Tito_Scwrl_2YXN.pdb: