Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQITPYEVIDGQLKGARQVPSPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQNKLDWSVHPYFQTIEGMQVSTHLLILR------------TGEVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIELEGSDD--------LPFEDLQYEVLTDVVTAIRQAYP-EIKNHIAGHSDIAPGRKTDPGPYFKWQHFRQLLAQKKT
4BXJ Chain:B ((12-170))--------------------------TTPYGKRVRFLVLHYTALDFAA----SV-------------KALT---TGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAG-----


General information:
TITO was launched using:
RESULT:

Template: 4BXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 624 -19917 -31.92 -144.32
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -31.92
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_4BXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BXJ-query.scw
PDB file : Tito_Scwrl_4BXJ.pdb: