Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRYIRNITDIDDKIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKAT--EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASE----RV----------DVE-VE------------KKHP---FDFVLWKH-AKEN--EPSW---ASPWGNGRPGW--HIECSAMS--TCCL-------------GNHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWIHVGFINVD-GEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSS-HYRSPVNFSDVALKEAKT--SLTRFYHSFKAYQQVYGQTT-----------TETLDQSFVERFNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWRRAD
1A8H Chain:A ((4-423))-----------------------VFYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGEDPKAFVDRVSGRFKRAWDLLGIA-YDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEY-EGLYCVSCE-RF--YTEKELV---EGLCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDLIRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSALDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAA-GIPMYRHLNVGGFLLGPDGRKMSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQRTRAMLFRFAEGRIPEPVAGEELAEGTGLAGRLRPLVR-ELKFHVALEEAMAYVKALNRYINEKKP------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1A8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1779 -35327 -19.86 -100.93
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -19.86
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_1A8H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1A8H-query.scw
PDB file : Tito_Scwrl_1A8H.pdb: