Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWNPNSIIFCFYFIFSILALWGIIEAWVHQSRTETIHPFKAFVHLLAFYLSYLLIPLWFFNLYAGWIGYYSIHETIFIFLLSGILIYARFIEPHMVRVDVHQYRLNPDRHFVKPVKVALIADLHIGLFSGH-------ERQLKIIVKKLNEQQPDLVVVAGDWTYEPED---KLVQELSVLKD-----------------------------IKAPVYSVPGNHDEQYPGPPIQQLLKDALYYNDVM-DIEG---------KIVEF----DEFRLIGIGDLWAG-------KTDMRSMPDL--PQDKPWLILSHNPDTVDM-------VPKLPNRPLMLSGHTHGGQVELPLVTNYIMKKVSILGHKRGFYSHEHADVFVTVGTGMVGIPLRFRVPPTIDIIELA
3T1I Chain:D ((28-273))-------------------------------------------------------------------------------------------------------------DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPNLNISIPVFSIHGNHDDPTGADALC--ALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEHECKIAP-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3T1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 797 -12990 -16.30 -76.41
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.54

3D Compatibility (PKB) : -16.30
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_3T1I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T1I-query.scw
PDB file : Tito_Scwrl_3T1I.pdb: