Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKEKDADTDPDTKMCDFVIKKSGKKITSGSVWPGATENFMVDGQW-----PVVSATQQCRITMSGLSDIDQYTIT---LCDKKEDETVSSDGRNTTVISSHGEWC--------------------------------------------------------------------------------------------- 5LB8 Chain:D ((4-444)) PERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKACGIVY-----CRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATI--SFDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKP--------SWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGCRHAAIAKYFGDALPACAKGCDHCQNPTAVRRRLEALERSSS

General information: TITO was launched using: RESULT: Template: 5LB8.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 208 6882 33.09 83.93 target 2D structure prediction score : 0.50 Monomeric hydrophicity matching model chain D : 0.55 3D Compatibility (PKB) : 33.09 2D Compatibility (Sec. Struct. Predict.) : 0.50 1D Compatibility (Hydrophobicity) : 0.55 QMean score : 0.091

(partial model without unconserved sides chains): PDB file : Tito_5LB8.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5LB8-query.scw PDB file : Tito_Scwrl_5LB8.pdb: