Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKFNSHSIPIRLNLLFSIVILLFMTIIGRLLYMQVLNKDFYEKKLASASQTKITSSSARGEIYDASGKPLVENTLKQVVSFTRSNKMTATDLKETAKKLLTYVSISSPNLTERQLADYYLADPEIYKKIVEALPSEKRLDSDGNRLSESELYNNAVDSVQTSQLNYTEDEKKEIYLFSQLNAVGNFATGTIATDPLNDSQVAVIASISKEMPGISISTSWDRKVL-ETSLSSIVGSVSSEKAGLPAEEAEAYLKKGYSLNDRVGTSYLEKQYEETLQGKRSVKEIHLDKYGNMESVDTIEEGSKGNNIKLTIDLAFQDSVDALLKSYFNSELENGGAKYSEGVYAVALNPKTGAVLSMSGIKH-DLKTG-ELTPDSL--GTVTNVFVPGSVVKAATISSGWENGVLSGNQTLTDQS-IVFQGSAPINSWYTQAYGSFPITAVQALEYSSNTYMVQTALGLMGQTYQPNMFVGTSNLESAMEKLRSTFGEYGLGTATGIDLPDESTGFVPK--EYSFANYITNAFGQ---------FDNYTPMQLAQYVATIANNGVRVAPRIVEGIYGNNDKGGLGDLIQQLQPTEMNKVNISDSDMSILHQGFYQVAHGTSGLTTGRAFSNGALVSISGKTGTAESYVADGQQATNTNAVAYAPSDNPQIAVAVVFPHNTNL----TNGVGPSIARDIINLYQKYHPMN
4R23 Chain:A ((50-475))-----------------------------------------------------KSAYVQRGAIITSDGVTLAESVKQD-------------------------------------------------------------------------------------------------------------------------------------------DGTYVRNYPHDGMASHTVGYISTQ----------------------YGTAGIESSMNETLTGH------R-S---ALY-S-MAGI-TTGSSVVLTINSQMQAVAEAALQG--------------YSGSIVVMDPSTGAVLAKASSPSYTHAELGTI--SQLVDRTTQALYSPGSSFKTVTLAAGIDTHKTTLDTTYSAPGTMEIGG-GTIHN-YANE-DMGTIPLREAFARSSNTALAQLGVA---------------LGAD---NLVSYARAFGYGTALGQDFSTT-PSLMPNPAEMTTWELAWASCGLPVGEHASPAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPE-----GAVVSTTSPKSLGQ-AVSADTAAQVREAMLGVVES--GTGM-G-AR-VPGVKIAGKTGTADVEN----GNFNSFFIGFAPYDHPTLVVSVVIEGNGENVLGYGAQVGGRVLAQCLNI--------


General information:
TITO was launched using:
RESULT:

Template: 4R23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2452 -4578 -1.87 -11.68
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -1.87
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_4R23.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R23-query.scw
PDB file : Tito_Scwrl_4R23.pdb: