Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKK--HVEILEELFPGYENTWRSSQEPA-RKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEER-QVWDAKYAEYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL
3G4T Chain:A ((4-251))LKIISWNVNGL---------RAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVE-------GY----RSFFTPAERKGYSGVA-MYTK--VPPSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSD-PGQYTWWSYRTRARE-RNVGWRLDYFFVNEEFKGKVKRSWILSDVMGSDHCPI------


General information:
TITO was launched using:
RESULT:

Template: 3G4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1248 29701 23.80 121.72
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 23.80
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_3G4T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G4T-query.scw
PDB file : Tito_Scwrl_3G4T.pdb: