Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNKKNLGIGGIIVLLIAAYLGLDLSGHKNNPTPSSIPVNQRTETTFSNDGVDTIKAAYERRQSNVQVQGSGRVKAILREDNDGSRHQKFILVLKNGLSILVAHNIDLAPKIEDLRKGDIVEFNGEY-EYNEKGGVLHWTHHDPQNRHENGWLKHNGRIYQ
3B4Q Chain:A ((4-93))------------------------------------------------LNSAPTPRDVVANAPAPVQAAVAGAQEYAAQAGLN--TEELAVDALYNAIKVRLAGGIP--PQIEAFYQANRTNFNGFYMA-NRGAIDFIFS---------------------


General information:
TITO was launched using:
RESULT:

Template: 3B4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 333 -18376 -55.18 -213.67
target 2D structure prediction score : 0.26
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -55.18
2D Compatibility (Sec. Struct. Predict.) : 0.26
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.169

(partial model without unconserved sides chains):
PDB file : Tito_3B4Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B4Q-query.scw
PDB file : Tito_Scwrl_3B4Q.pdb: