Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDRSWSRKRGSFLQQEPEIQKEVRKLTKLLRENETIIRYKELEEKIQQNQYLAELREKIKQAQKDAVHFAHYDKPAAEKEAIKQADQFMQEFDQHPLVVAYRKQLLEADDLLHHLTTMIQEEINGQIEEEKHASKN
2PIH Chain:B ((3-122))-------------LYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTG----


General information:
TITO was launched using:
RESULT:

Template: 2PIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 227 -16575 -73.02 -138.13
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -73.02
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.725

(partial model without unconserved sides chains):
PDB file : Tito_2PIH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PIH-query.scw
PDB file : Tito_Scwrl_2PIH.pdb: