Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNENPLAVKLPGLELKNPIMPASGCFGFGKEYGKYYDLNQLGSIMVKATTPNARFGNPTPRVAETPSGMLNAIGLQNPGLDVVMHKLLPELEEYNELPIIANVAGACEEDYVEVCSKIGEAPNVKAI--ELNISCPNVKHGGIAFGTDSDVAFQLTQAVKKVSSVPVYVKLSPNVTDIVPIAQAIEAGG----ADGFTMINTL-LGMRIDLKTRKPILANQT--GGLSGPAIKPVAIRLIHQVASISSLP---IIGMGGVQTVDDVLEMFMAGASAVAIGTA-NFTDPYICPKLIKELPVRMSELGIESLERLIKEVREERER
4EF8 Chain:A ((37-344))-----LQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYL-AYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-GKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYF-DFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANIN--AFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRYQTLDEFRGKVR-----


General information:
TITO was launched using:
RESULT:

Template: 4EF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1746 -70234 -40.23 -238.08
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -40.23
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_4EF8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EF8-query.scw
PDB file : Tito_Scwrl_4EF8.pdb: