Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceRRMCILTLAEKTQNPEKPNFLEDTYQEVEAPAAAMLSYGGHEIHFEL-DKNCWPRLRHGS----AVPPGYSAHIYSEGSDKYPPTSAVIEGTHVQKLPGFNPKGNVRFYEKL-IG----LS----
2PIA Chain:? ((1-103))----------TT--PQEDGFLRLKIASKEK-----IARDIWSFELTDPQGAPLPPFEAGANLTVAVPNG-SRRTYSLCNDSQERNRYVIA---VKRDSN-GRGGSISFIDDTSEGDAVEVSLPRN


General information:
TITO was launched using:
RESULT:

Template: 2PIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 321 30308 94.42 340.53
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 94.42
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_2PIA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PIA-query.scw
PDB file : Tito_Scwrl_2PIA.pdb: