Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKNNSRQFINGQRVAV-NVPALESIAAKDYEPTGYVFSQATLEEVDQAAQAAHNAFL--VYSQTTQEQRASFLEEIARQIEALGANLQEVASLETGLPLARLQGETGRVTGQLRLFAELLRRGDFYGARIDVALPERKPLPRVDLRQYKVGVGPVAVFGASNFPLAFSTAGGDTVAALAAGCPVVFKAHSGHMATAELVAEAIEKAIEVCGMPKGTFNMIFGGR--IGANLVEHSLIQAAGFTGSLEGGMALYNLAQSRPQPIPFFAEMSSVNPVVVLPEALHSRGEQIAQDTVASFNMGCGQFCTKPGLILGVKGPEFDRFITALAENTQK----------AVPQVMLNEGTLKSYRAGIDALINEAGFEIIASGQEP-----ELVSQAKAHLFKADQSVLLSGNPKLQHEVFGPMSIVIAVEDEATLLKGIEALGGQLTATIIGDENELSKAGELLDLLTRKAGRVLFNGFPTGVEVSDAMVHGGPFPATSDARGTSVGTGAIERFLRPVCFQNTPQVLLPDALKDSNPLQITRLVNGQLTQAQI
4QN2 Chain:A ((29-506))----SQRQYIDGEWVESANKNTRDIINPYNQEVIF-TVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADK--DGGEMID----SPI--PDTESKIVKEPVGVVTQITPWNYPLLQAS--WKIAPALATGCSLVMKPSEITPLTTIRVFELM----EEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGSIETGKHIMKNAA--NNVTNIALELGGKNPNIIFDDADF---ELAVDQALNGGYFHAGQVCSAGSRILVQNS-IKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDV-AKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTS----MRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIG--KAQRVANKL--KLGTVWINDFHPY---FAQAPWGGYKQ-SGI--GRELGKEGLEEYLVSKHILTN------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4QN2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2802 -2024 -0.72 -4.42
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -0.72
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_4QN2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QN2-query.scw
PDB file : Tito_Scwrl_4QN2.pdb: