Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLALFDLDHTLLNTDSDHSWGEFLVNEG-LVDP--VHHRQMNDKFY-----------EDYKAGQLDPYAYNEFVFGFLTKHDNNYLTELHQLFMEKVI------------------RPKMRPKGFDAIKKHQDLGHTIVGITATSDFITAPIFR--EFGIT----EILATNAEVADGKYTGKVA--------------------------GLACYQKGKLARLEAWLDGRSVSESWAYSDSI-NDRFLLEY--A--THAIAVNPDDRLEKLAQEHNWEIQDWSI
4AS2 Chain:D ((26-293))-AYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPS-LKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLK-NRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR-WKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQ-------------


General information:
TITO was launched using:
RESULT:

Template: 4AS2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 914 12750 13.95 64.07
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.65

3D Compatibility (PKB) : 13.95
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_4AS2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AS2-query.scw
PDB file : Tito_Scwrl_4AS2.pdb: