Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIVKRSFNMTFAIKKIHHVAYRCKDAKETVEWYKKMLNMDFILAFAEDHVPSTKAFDPYMHLFLDAG-QGNVLAFFELPTQPEMGRDENTPQWVQHIAFEVEDLNALLAAKKHLEDNGVKVLGITNHGIFHSIYFFDPNGHRLELTYNDAHAEEKIAKIT-EEMKTEMLEEWSKTKRAPHHTHFLHEEELGA
3OAJ Chain:B ((147-304))---------PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGDF------------VRYRSAGDIGNVIDLKLTPIGR----GQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDPP--GFAHDETQETMGEKLMLPVQYEPHRTQIEQGL--------


General information:
TITO was launched using:
RESULT:

Template: 3OAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 559 2149 3.84 13.77
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : 3.84
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_3OAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OAJ-query.scw
PDB file : Tito_Scwrl_3OAJ.pdb: