Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------MSEKLQKVLARIGLG-SRRYMEEVIAAGRVSVNGRVA-QVGERIEPGDELRIDGRKVQFQIED------EIRRRVLIYYKPEGEICSRNDPEKRPTV----FDHLPQIAN-DRWVMVGRLDINSTGLLLFTNDGELANRLMHPS--NEIEREYAVRVMGEVTPQLRQNMVNGVELEDGPAKFESFSEIGGEGINRWYQVVVKEGRNREVRRIFESQGLKVSRLLRTRYGTVILPRELRTGRWMELDKTDIDNLAKSVELKPRQ--GTGLFGMAKRRTERMTEK--PMAARRGGYLRQQRRDDEKEAPANTGNQRKSTGFNRGFKKF
2IST Chain:A ((1-324))AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIERFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG--GTVDEPISRHPTKRTHMAVHPMGKPAVTH-YRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGAS-EAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDW---------------


General information:
TITO was launched using:
RESULT:

Template: 2IST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1425 88020 61.77 305.62
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 61.77
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_2IST.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IST-query.scw
PDB file : Tito_Scwrl_2IST.pdb: