Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSTPCKLRGDDFMAKISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKKAPDMTFEDLYNEWITHQRTSVKASTIAISVRYANNQILPAFGKLKLSNISVPYCQKVVDEWHSKYESYDYMRKQTAQILRYGVAMQYIDNNPMEKTLLPRKKEYEKNRKFYSKEELNNLLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFNKELHVNKTLAVDEFGKVIIQSPKTRASRRVISLDTETLSILNNWKLQQKEEYLKLGYNTSSKEQHVFTTVKNTLYIPNTVNDWLRYILKKYNLP----RITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYAHITNNAPKKTGQDFADMMAHQ
1AIH Chain:A ((4-161))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAFLYERDIYRLLAECDNSRNPDLGLIVRICLATGARWSEAETLTQSQVMPY--KITFT--------------NTKS-KKNRTVPISDELFDMLPKK------------------RGRLFND----------AYESFENAVLR-AEIELPKGQLTHVLRHTFASHFMMNGGNILVLKEILGHSTIEMT-MRYAHFAPSHLESAVK---------


General information:
TITO was launched using:
RESULT:

Template: 1AIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 632 -71298 -112.81 -462.97
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -112.81
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_1AIH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AIH-query.scw
PDB file : Tito_Scwrl_1AIH.pdb: