Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLRVRLRVPKQWDRFQVNIDEELQQEELSRTLTEREIDDFNRRNLHSVSELSDHLRLLVFGSDECVTCSEDICAAVEYIVGPQRRWNSSCDEVCEFRRAISRAYLNEWKAFQSVHPSVPERLATRSLPQVFSVPPLQKAQMDLLMQMCPRNAETGDGSISMRLWYLDSAGSRCSTRRRFPFDTAADDAIRLTMSSAREFASMREKTDDTPLIFVFRVKGRNEYIYGSQPLINYRYIRHCVSKRAEIDLVVEPKEATLFAVPLFRPSYPSRTLASPSDADASKSSTSEICLWDLTSKLSIRIVGGFEKLAISASRMKDENVRDSSSLYFAVLVEAYVGTWRCCEPQITDWQLCENAKNSHSLAARVYWKDGGTVTFSIDLSNVPRELKLCFTLVASSTDRIVGARAATAEEVIAAVEVNTKKTDDQGHSVFFLGTAATQLFDYAAKMRMGMWRIYLWEGKTRANPIGLNSINPD-SNACTFEVEFPCFDKPVFFPSGRPPKRKEEDARRNFADREAALSSYLINNEVEQLRQLKRVLMYDPLVHLSSDDKTILWKYREMLLGQPKAMAKVMSAVNWLMPFDVYEAHCLLRRWSPLA-----AFDALELLDAHYADLAVREQAVEYIDKMSDYELRGCILQLVQVLKYEPYHYSALARFLLRRSLRSNHIIGHYVFWYLAAEVK-NLTICERHGLLLEELIKR--SPHRLDYVRQVYVCNELLKCALRVQRAPK------KDRVKCLRASLAKVR---FPHRFTLALNPSVECCAVDIDECKVMESKKFPLWLAFRN---HLDQDEHFFIIFKSGDDLRQDLLTLQLLEFMDSLWKASGLDLHLIPYGCISTGEGVGMIEVVLNSDTIANITRREGGAQAAFNVDPIINWLRQFNHDRGEVERCLWNFVLSVAGYTVATYVLGIGDRHNDNIMLRQDGTLFHIDFGHFLGNFKTKFGIKRETAPFIFTPMYLYAMGGS---SSPIFKYFVDVACRAYNALRRHSSALMMLFMLMLSTGIPELQTLEDIEWLRTVLLLNRTDEEASDHYKGLINDALGNFRTLLNDYIHIMVH
1E8X Chain:A ((1-951))-------------------------AASEETLAFQRQLNALIGYDVTDVSNVHD-------------------------------------DELEFTRRRLVTPRMAEVAGRD------PKLYAMHPWVTSKPLPEYLLKKIT-------------NNCVFIVIHRSTTSQTIKVSAD----------------DTPGTILQSFFTKMANERDFVLRVCGRDEYLVGETPIKNFQWVRQCLKNGEEIHLVLDTPP---------------------------------------DPALDEVRKECDRKFRVKIRGIDIPVLPRTADLTVFVEANIQYG----------QQVLCQRRTSPKPFTEEVLW--NVWLEFSIKIKDLPKGALLNLQIYCQ-----------------------------------LLYYVNLLLIDHRFLLRHGEYVLHMWQLSGFNADKLTSATNPDKENSMSISILLDNHPIALEMPN-------------------------------QLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKDPKAYPKLFSSVKWGQQEIVAKTYQLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLR-NKRIGHFLFWFLRSEIAQSRHYQQRFAVILEAYLRGCGTAMLHDFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENLQNLNLPQSFRVPYDPGLKAGALVIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGNTGAFKDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMISETGNLFHIDFGHV---------------PFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKSEEDAKKYFLDQIEVCRDKGWTVQFNWFLHLVL


General information:
TITO was launched using:
RESULT:

Template: 1E8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4292 -189080 -44.05 -231.43
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -44.05
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_1E8X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1E8X-query.scw
PDB file : Tito_Scwrl_1E8X.pdb: