Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKSLILVSHGRFCEELRGSTEMIMGPQ--DNIYTVALLPEDGPEEFTAKFEAVIEGL----DDFLVFADLLGGTPCNVVSRLIMEGRDIDLYAGMNLPMVIEFINASLTGADA-DYKSRAAESIVKVNDLLAGFDDDEDE
5T3U Chain:A ((7-139))FNRGILVASHGNFASGALMTAEMFVGETTNDRVRTLGLMPGENIVEFEHYFKNQVDELLDSNQEVIVLTDLIGGSPNNVALSRFLNLDSVDIVTGFNIPLLVELISSYDSKINLEEIVHNAQNSLFNVKQQLN--------


General information:
TITO was launched using:
RESULT:

Template: 5T3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 575 -21222 -36.91 -168.43
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -36.91
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_5T3U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T3U-query.scw
PDB file : Tito_Scwrl_5T3U.pdb: