Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIKIKREEIMKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINS--KWVGLDNFRFLFSSRDAFIIT--------RNTVLYNL---GFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFGYSS--VMYYATI--------------MGIDPTY--YEAATVDGASKWQRIRNVTIPQLTPLVTVL-----TILAVGN--IFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
4Q3O Chain:A ((31-347))-EVPIPQS-ISAEFKAALAQY--------PTPSVEEARSFVPT--TAAQWRDYVQATNKMQKTKIKNMRKHYGVTVELLDIKGVTVRKITPKSLSPEFKDHVYIDIHGGAYVLFAGLPSIEEGILIAHRLG---IVVYSVDYRMPPAYPF-------PAALDDVKHVYRVLSQQYDANHIFMGGTSAGGGLLLAFVQGLIENGVATPRAIYAGTPWADLTKTGDSLYTNEGIDRILITYDGTLGASARLYAGNTPLTHPKLSPIYGDFTDFPPTFLVTGTRDMFLSDTVRVNRKMRDAG----VTTVLDVY--EGLSH-ADYLVSHQTPESQSVYRQLKRFLVGFT-----------


General information:
TITO was launched using:
RESULT:

Template: 4Q3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1459 -108770 -74.55 -389.85
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -74.55
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_4Q3O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q3O-query.scw
PDB file : Tito_Scwrl_4Q3O.pdb: