Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREKMRFPTLVFDIETLTDLKAGAHLYHLDLPEADVEQALTKIRRQESGMDFQRLPLHEIVCISGLWIDESGFRLF----------------------SFSREHYSEAEILQKFLSIFDKRHP-TLVSWNGSQFDLPVILFRAMYHGLSAPGLFDQGELDSQKRFNNYQNRYHHRHIDLMDVMAMF-N--GRNFQKLDDVACILGLPGKRGESGYHVPEYVRTEQWLKLTSYCEGDVLNTWFIYLRWLLLKGQMNVDEHNHWISSSIEYLQTMPQQADFLEVWQRTSKHTEFTSHYFNPLNF
4M8O Chain:A ((281-495))---FADPVVMAFAIATTKPP-----------------------------LKFPDSAVDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIRDVRPTVISTFNGDFFDWPFIHNRSKIHGLDMFDEI--GF-AP--DAEGEYKSSYCSHMDCFRWVKRDSYLPQGS-QGLKAVTQSKLGYNPIELDPELMTPYAFE-KPQHLSEYSVSDAVATYYLYMKY-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4M8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 762 -29297 -38.45 -160.97
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -38.45
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.294

(partial model without unconserved sides chains):
PDB file : Tito_4M8O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M8O-query.scw
PDB file : Tito_Scwrl_4M8O.pdb: