Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALIRKRRLTEQQQRRIEKQHKTRQEEVD-TSQDLDGLVVQHYGRQLEVQALSVPAHHPEKPQVAEGEPEPFWKPIELNSVWRCHTRTNLELLVTGDRVKWQADPNTGLGIITAIHPRTSLLTRPDRYHKVKPVAANISLIVIVFAPLPEPAPTLIDRYLVACADANIPALLVLNKSDLLTEN-N-PILDMLKEYENLGYEVMICHS-KGD-ISALSQRLDGETVAFVGQSGVGKSSLINVLIPDAE-QKTNIISENSALGQHTTTSTRLINFGRNGALIDSPGIREFGLWHLDLDKIRMGFPEIEAHLGSCQFRNCTHTHEKNCGLKQAVEAGEILPRRLDSFLRLIDEIQEAQQKN
2RCN Chain:A ((43-345))-----------------------------LFGEPAEGIVISRFGMHADVESAD-------------------------GEVHRCNIRRTIRSLVTGDRVVWRPGK--VKGIVEAVHERTSVLTRP-----VKPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQNEILTN-------------TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA------


General information:
TITO was launched using:
RESULT:

Template: 2RCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1394 -8041 -5.77 -29.56
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -5.77
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_2RCN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RCN-query.scw
PDB file : Tito_Scwrl_2RCN.pdb: