Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETTDTLLQLLQEAHKTNQAQQQTIQN-LTTEIQLLNEKVNYLTNKLFGRSKETLFEETNGQLNLFSDEEISVSVPEAAATIIPVKGHQR--VVGTKAD----KIKHLPITEKEHL------LPLEEQFCEHCGSQMKDIGRTKVREEIRFHQAMLDCLTHYQHTYCCKSCEKEGLSSFKKAIVPKPLISNSLGSNSLVAETIRMKFGQKVPAYRQENYWKQTHGLDISRDNITNWHIKAVQNAL---DPLGERLRVNNNQEEILHGDETSYRVIESAKTDTYYWQFCTGKDSQHPIVYYHHDESRAGDVPKTFLKEFTGYLHCDGYSGYNAVE----SVRLVYCFAHVRRKFFEAIPKEKKNTDIPAAQAVKQLDKWFVLEKKWKDFSPEKRLSCRQQELRPLFIAFYEWMATIDPVAKSKLDAAVQYACKLRSGFEPIFEDGRLELTNNRAERNIKELVIGRKNWLHSTSLEGARTSGIILSVYKTAELNGLNPVKYLEFLFDKIPNLPVLSAETLDQLLPWNKDVQQHFSRN
4YZF Chain:A ((381-887))--------GLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQMG---VSELLISTAVQGILFALL-GAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYLP--NTALLSLVLMAGT--FFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVVIHP---------------------LGLRSEFPIWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMP-------WLSATTVRSVTHANALTVMIQEVKEQRISGLLVAVLVGLSILMEPILSRI---PLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLD-------------


General information:
TITO was launched using:
RESULT:

Template: 4YZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2292 -46286 -20.19 -101.73
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -20.19
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.131

(partial model without unconserved sides chains):
PDB file : Tito_4YZF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YZF-query.scw
PDB file : Tito_Scwrl_4YZF.pdb: