Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKVEKIVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGLIIPVVISVYEDRSFTFVTKTPPAAVLLKKAAKIEKGSGEPNKNKVAKVSSDQVREIAELKMEDLNAANVEAAMRMVEGTARSMGITVE
2K3F Chain:A ((1-140))MAKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV


General information:
TITO was launched using:
RESULT:

Template: 2K3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 649 -81037 -124.86 -578.83
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.94

3D Compatibility (PKB) : -124.86
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_2K3F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2K3F-query.scw
PDB file : Tito_Scwrl_2K3F.pdb: