Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFKPLAYILLATSSLTACTMAPVKEQKIEPFVFKEPELTPPFYALNPFNYDAPPAFEVALKEAAAQPVTKMVVTRQDDPTKTLTLDTNKLIVPTVNNSQRSMKYAVLAGDNEIDVTEIDDFLQLVEGKARHYPPRFTDRQERKGFESKLMEVTQRLDTLAANPDASFDILIRAFKASVLARNLDLGTAHTTKSLEYAQRLLKINPD-DAEANFWFGFGLSEGGGQREAIPYLDKAIKG--NVQEAYLAAANNYIAMEQKKNAIQTLKNYKVKYPDEAE-------VADRLIQEIEKQGRWNVWQVLTNPAMSSATPSAATKK
4I17 Chain:A ((22-146))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV---------


General information:
TITO was launched using:
RESULT:

Template: 4I17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 433 19306 44.59 167.87
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 44.59
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_4I17.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I17-query.scw
PDB file : Tito_Scwrl_4I17.pdb: