Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHYTGIDQLINSFDQALRSLVPGATAAQRQNPAETVEAKLGVEDARHVAGLMRVNHSGEVCAQALYHGQALTAKL---PNVRREMQQAAIEEQDHLAWCEDRLKELNSHTSLLNP-IWYGLSYGMGALAGIAGDKYSLGFVAETERQVSLHLQDHLNQLPAQDERSRKILEQMNEDELHHRHTALEAGGVELPYAVKITMTAISKLMTKTSYYL
2YW6 Chain:B ((11-155))------------------------------------------DKKASDVADLLQKQLSTYNDLHLTLKHVHWNVVGPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDDYS-VERDTVQAHLAALDLVYNGVIEDTRKSIEKLEDLDLVSQDLLIAHAGELEKFQWFVRAH---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 551 -4052 -7.35 -28.73
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : -7.35
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_2YW6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YW6-query.scw
PDB file : Tito_Scwrl_2YW6.pdb: