Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTSTAKHNYAPDILGAGYEQLTLNFPDDYEGKVVATLVRKKATQPTQKAVLYIHGFLDYFFQ-TEMAEQFNAHGYDFYALDLRKYGRSKLPHQIF-YNVLDLIEYDAEITQALEIIGQEKHTQVLLAGHSTGGLTATLYAAHHPDHPLIKALWANSPFYDFNLSLVEKKFGIPMLSRVGKYLPKVKFPSQLNKWYTTSLHKQLKGEWDFNLDWKPTSAPTVQLSFVHAIHTAQKEIHRGVKLNIPALIMHSHQTKNPRKWGPDA------TQSDVILDVKDIAKFGKKMKGDVSVVSIHNGLHDLVLSAQPVREQVYQQLFQWLDQKVT
1Y37 Chain:A ((1-294))--------------MFEGFERRLVDV-----GDVTINCVVGG----SGPALLLLHGFPQNLHMWARVAPLLAN-EYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFER---FHLVGHDRGGRTGHRMALDHPDS-VLSLAVLDIIP----TYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASLPGG-HFFVDRF---PDDTARILREFLSDARS


General information:
TITO was launched using:
RESULT:

Template: 1Y37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1693 -38436 -22.70 -134.39
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -22.70
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_1Y37.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y37-query.scw
PDB file : Tito_Scwrl_1Y37.pdb: