Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKIDGYIKLQVPAGKANPSPPIGPALGQRGVNIMAFCKEFNAATQKVEPGLPIPVVITVYNDKSFTFIMKTPPASILLKKAAGIQKGSSVPNKTKVGKLTRAQLEEIATTKEPDLTGADLDARVRTIAGSARSMGLEVEL
5O60 Chain:J ((10-142))-------LIKLQIQAGQANPAPPVGPALGQHGVNIMEFCKAYNAATESQ-RGNVIPVEITVYEDRSFTFALKTPPAAKLLLKAAGVQKGSGEPHKTKVAKVTWDQVREIAETKKADLNANDIDAAAKIIAGTARSMGITVE-


General information:
TITO was launched using:
RESULT:

Template: 5O60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 549 -70673 -128.73 -531.37
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain J : 0.87

3D Compatibility (PKB) : -128.73
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.708

(partial model without unconserved sides chains):
PDB file : Tito_5O60.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5O60-query.scw
PDB file : Tito_Scwrl_5O60.pdb: