Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASRPVLATGITTELKIRGKSMNILTDKAHYESHLEAYIVQKLQAQGWVVGQSKNYHTEYALYPEDLITWIQATQPEKWEKLQALNGSNTEKRIIDRLDDELNKKGTIHIFRNGFSMAGAGTIDLSESAPEDGRNQAVIDRYNANILRVVPQLKYHPSKDA---GILDLVFFINGLPMATVEIKTEFNQSLEDAIEQYKNDRKPIDPKTRRKEPLLTPKRGAIVHFALSESEIAMTTALDGESTYFLPFNKGNQGHAGNPPADVAKGEDYPVAYFWDYVCQRDNWLKIFHNFVYVEKKNKVDLYGNWTVQERLIFPRYHQFDAVNKIIADVQEKGVGLNYLCEHSAGSGKTSTISWVCHSLVRLRH--NDGTPFYNSVIVVTDRTVLDNQLQEAIQQLDHQKGLIAAINRDDKEHAGKSKSKQLEDALLSNKQIIIVTIQTFPHVMEAILTNTSLSDRNYGIVIDEAHTSQTGSTASKLQATLALQSGEAMANLTVEELLEQIQKARVQSKNISHFAFTAT-PKHSTKMLFGRTKNG---EPASDDNLPEPFHLYPQRQAIE-EGFILDVLQGYVPYKTAFKLGGEAVDDDKRVNSKAAKKALARWMALHATNVTQKVQFIIQHFHHNVANLLNGQAKAMIVTSSRPAAARYKIALEKYIDDNPEYSAYRVLVAFSGKLTGKQISHEADGDSENGVLFQVGEDAEF---TEANMNADAPNSDLRIAFDRPEYRLMVVANKFQTGFDQPKLCAMYIDKVIANEVEVVQTLSRLNRTTTGKDQTFV-IDFVNDPEWILKCFKKYDNGAKMVDVQDPNVVYTIKDNIEELDLITEDDLEEFKAARFKTIRDISNHDFKETTHPDLFKATDRVARLFNQKLKMLKQAIELQETAFDQAKADGNDEGAEKAEFERKQLDVELQTLMRFKGNLDKFSRIYSYVAQLIDFGDPELENFSAFTKLLSKRLNGMSAKEIDISGLVLTGFGIFKKKLKTDDTDHPEADEPQPLAPIQGTANGDLQPTKMTYLKEVIELIAQTFGDISTREEQVVYINHLVTILRNNDVV--MAQIENNPESTALQGNLPSATKGAIIQALTSHQDLSALLLKTDAQAMQNVIKVLYKLLKDGETIDVHRLT
5AWH Chain:A ((20-778))--HMQLVSNGFEVNLP---DQVEVIVRDLPDPSKVKEERTRLMGYWFVHWFDGKLFHLRIKAGGPNV-------DGEHRAIRTAEHPWLLRARLDDALEEALPKYAAVK--KRPFTFLAQKDELIDAAATAAGLSHRLLNS-----FKVIPRFALSPKIYEPVDGTTRVGVFV------TIGMRYDIEASLRDLLEA------------------------------------------------------------------------------------------------------GIDLRGMYVVRRK------------------------------RQPGERGLLGRVRAISDDMVQLFEETDLASVNVNDAKLEGSKENFTRCLSALLG-----HNYKKLLNALDDQEAGYRTGPRFDDAVRRMGEFLA-------------KKPIRLADNINAQVGDRIVFSNEG------------------------------QARNVRLAPKVEYVFDRTGAKSAEYAWRGLSQFGPFDRPSFANRSPRILVVYPSSTQGKVENFLSAFRDGMGSNYSGFSKG------------------FVDLMGL------TKVEFVMCPVEVSSAD-------------RNGAHTKYNSAIEDKLAGAGEVHAGIVVL---------FEDHARLPDDRNPYIHTKSLLLTLGVPTQQVRMPTVLLEPKSLQYTLQNFSIATYAKLNGTPW------TVNHDKAINDELVVGMGLAELSGSRTEKRQRFVGITTVFAGD-----------GSYLLGNVSKECEY--EGYSDAIRESMTGILRELKKRN-------------------NWRPGDTVRVVFHAHRPL--KRVDVASIVFECTREIGSD-------QNIQMAFVTVSHDHPFV---------------LIDRSERGLEAYKG-----STARKGVFA----PPRGAISRVGRLTRLLAVNSPQLIKRANTPLPTPLLVSLHPD------STFKDVDYLAEQALKFTSLSWRSTLPAATPVTIFYSERIAELLGRLKSIPNWSSAN--------------LNIKLKWSRWFL------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5AWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3971 168702 42.48 227.05
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 42.48
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.157

(partial model without unconserved sides chains):
PDB file : Tito_5AWH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AWH-query.scw
PDB file : Tito_Scwrl_5AWH.pdb: