Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLA-GREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISH-EPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSG--SIRDDGLRKVLSGKTTLEEVLRVTNEASEA
5TSH Chain:E ((202-588))---------------------------------------------------------------------------------------------------------------PVVKLVNLILTDAIKRKASDIHIEPYERSFRVRYRIDGVLYEVMKPPLKLKNAITSRIKIMAELDIAERRLPQDGRIKIKLGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPDALHYFKEAIHKPFGMVLVTGPTGSGKTVSLYSALGELNKTTENISTAEDPVEFNFAGINQVQMHEDIGLNFAAALRSFLRQDPDIIMIGEIRDFETAEIAIKAALTGHLVLSTLHTNDAPATINRLLNMGVEPFLVASAVNLITAQRLARRVCSECKQPEEIPIQALIDAGVSPDEGPSYVCYKGTGCVKCNNTGYKGRVGFYQVMPMLEEIRELILNGANTAEIKRESM-RLGIKTMRQSGLTKLKEGVTSFEEVLRVTVADD--


General information:
TITO was launched using:
RESULT:

Template: 5TSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 2002 -22733 -11.35 -59.35
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain E : 0.78

3D Compatibility (PKB) : -11.35
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_5TSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TSH-query.scw
PDB file : Tito_Scwrl_5TSH.pdb: