Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIAALHQPSQVQLNQDGNLKHFLTIEGLSKENLTKILDTAQSFLDDNNNLINRPLLEGRTVMNLFFENSTRTRTTFEAAAKRLSANVLNIDIARSSTSKGETLRDTLWNLEAMAADIFVVRHSSSGAAHFIAKDVCPKVAIINAGDGRHAHPTQAMLDMLTIRREMKKPFEDLSVAIIGDIKHSRVARSDVAALQTLGCKDIRVIAPNTL-LPVGFSEY----GDHVRLFNNMDEGITGCDVIIALRIQNERIDSPALSSQSEFYRMYG---LNKERLSLAKPDCIVMHPGPMNRGVEIDSSIADGEQSVILKQVTNGIAVRMAVLALSMQGQLQEQGLIDAIAL
5G1O Chain:C ((13-308))--------------------QHILSVQQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVLSF--------KGESLADSVQTMSCY-ADVVVLRHPQPGAVELAAKH-C-RRPVINAGDGVGEHPTQALLDIFTIREELGT-VNGMTITMVGDLKHGRTVHS-LACLLTQYRVSLRYVAPPSLRMPPTVRAFVASRGTKQEEFESIEEALPDTDVLYMTRIQKER-----F---------FGQFILTPHIMTRAKKKMVVMHPMP--RVNEISVEVDSDPRAAYFRQAENGMYIRMALLA------------------


General information:
TITO was launched using:
RESULT:

Template: 5G1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1385 -106843 -77.14 -394.25
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain C : 0.76

3D Compatibility (PKB) : -77.14
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_5G1O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G1O-query.scw
PDB file : Tito_Scwrl_5G1O.pdb: