Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNSEFQPNWLYPPSEVIKNFIQLNNIDTSAF----------DVSTKKIIDDLVNQNTKID--LYTSEVLKEAIGGTTQFWLNIQNQFTINSLRI------QNSSVDNNFSEYRNLVNELKKLHWTPESKYD-YLDQINLKSFFGISEFSLLTKKYIVQHNLRVKFKNIGQYNSSELNVATLIRKAELEAKKQPILSPWNKLLFIEKLQEIKKLSKVKGFKNFRNELLSICNQ----------------------CGVAFIVLDTLNKSPIRGISKFL---DSNIGL--------IIVTTKYNKDDVFWQTFFHEAGHLVLHSKEMVFSD-QGDLNKEASHNLEEAQADEFMLTHILHPYTIEEVTNMFNTRIMYKSKTESWRNICQIARQVNISPSL-----LTGILKFQGIIPYSYFTNGHEKLYD------------------------
4MT0 Chain:A ((1-445))---CTMIPQYEQPKVEVAETFQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYNAVRIA-VQGRRDFRRRPAPAEALIESAKADYAHAA-RSREQARNALATLINRPIPEDLPAGLPLDKQFFVEKLPAGLSSEVL--LDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLADLYKALGGGLKRDTQT


General information:
TITO was launched using:
RESULT:

Template: 4MT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1233 30226 24.51 83.27
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 24.51
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.140

(partial model without unconserved sides chains):
PDB file : Tito_4MT0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MT0-query.scw
PDB file : Tito_Scwrl_4MT0.pdb: