Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSSNTSRIAVQQIDPHELKAWIKAQALDLGFADCVSAKPDAQEQMPRFLEYLERGYHADMTYLEENLEKRADPTLLVPGTKSIICVRMNYLVESPKPRYVPFEPNSA-ITARYARGRDYHKVMRGRLKTLATR-IREKVGDFESRPFADSAPIFEKSLAESAGMGWTGKHTLLIHKKSGSLFVLGELFTSLDLPFDEPATSHCGSCSACIDICPTQ---AIVEPYTLDARRCIAYLTIEYKGIIAEELRAGIGNRIFGCDDCQLICPWNSFAKTASIPDFNPRHGLDNISLLDIWQWDEATFLANTEGSPIRRTGYQSFKRNIAIGLGNAPYSKEIVDQLNKGKSLHDEIVNVHID---WAIEQQLNQL-
4MFL Chain:A ((23-345))M-DPETVRIALGL--EERTAAWLTELDELGPPAEPVRLPRG--EEARDLLRRLEVPELDAEEIVAAAPDPDRDPALWWLLERTHHAIVRHMGDHRAKPRGGPPLPYEGGAAARYFHVYVFLATVPAVRRFHAERGIPDEVGWETLTQLGELVAIHRRKY----GQGGMNMQWWTTYHLRGILYRLGRLQFSLATGKDG--TPHLGLA------VPEWGGPLLPKAYDESLHRARPFFDRHFPEHGAR------------------VAWGSSWMLDPQLEEYLTEDS-------NIIQLARFWTLTDSAPEPGNADGDSSILEFVF------RYNGQPLDELPQRSSLERAVIAHLKAGRHWHMRTGFVKLP


General information:
TITO was launched using:
RESULT:

Template: 4MFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1450 -53409 -36.83 -170.09
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -36.83
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.198

(partial model without unconserved sides chains):
PDB file : Tito_4MFL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MFL-query.scw
PDB file : Tito_Scwrl_4MFL.pdb: