Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIQVKNIEKHFGAFHALKNISLDFPEGELVALLGPSGCGKTTLLRIIAGLESAEGGQVLLEGEY----ATNVHVRERQVGFVFQHYALFRHMTVFDNIAFGLRVRPRATRPSEAEIKKRVTRLLDLVQLGFLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRNLHDELHITSIFVTHDQEEALEVADQIIVMNKGNVEQIGSLREVYEKPATPFVFDFLGQANRFEGE-HASGI--IRIGNDRIELPTTVQAPQG-KVIAFARPDE--LHIHAQPQANTIEATFVREVWIAGKVVAELQDRNGRLIEIALSSEAAKQHAFKPNQTVWVSASQLHLFADQVA
3FVQ Chain:B ((4-294))-ALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIAYGLG----NGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCRLG----RLPVQSGAPAGTRGTLLIRPEQYSLHPHSAPAAS---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3FVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1402 -32116 -22.91 -114.29
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -22.91
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3FVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FVQ-query.scw
PDB file : Tito_Scwrl_3FVQ.pdb: